BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021D12SP1|AL427767
(906 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig303 966 0.0
>3x_Contig303
Length = 1005
Score = 966 bits (484), Expect = 0.0
Identities = 498/505 (98%), Gaps = 1/505 (0%)
Strand = Plus / Plus
Query: 3 agaattaagaaataagtgttgaaaagttcaataggccaactattttgggttaaacagtga 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agaattaagaaataagtgttgaaaagttcaataggccaactattttgggttaaacagtga 560
Query: 63 caaattgacagggaatccaaactagtgttaatgaacttaaattgaaatagaaataamagt 122
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 561 caaattgacagggaatccaaactagtgttaatgaacttaaattgaaatagaaataaaagt 620
Query: 123 aaaactgaaatatgatgtaattagtggttaggttcttaatttgaaggttccaaaagcact 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaaactgaaatatgatgtaattagtggttaggttcttaatttgaaggttccaaaagcact 680
Query: 183 aatacaggcggaagtttatgcgaagatttattaatagatagtagtagtgatagtmatagt 242
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 681 aatacaggcggaagtttatgcgaagatttattaatagatagtagtagtgatagtaatagt 740
Query: 243 ccacttcgatcgtagttagtgtgaagagaagaacttgaccaaagaataamaaaccagaaa 302
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 741 ccacttcgatcgtagttagtgtgaagagaagaacttgaccaaagaataaaaaaccagaaa 800
Query: 303 gtgagaaamaatattatcctgggttgacgaatgtcatattaccacactataacaataacg 362
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gtgagaaaaaatattatcctgggttgacgaatgtcatattaccacactataacaataacg 860
Query: 363 ccaagcatgctagtgcacctgcgaa-ccaccagamaccttgttaccgatattctcatcaa 421
||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 861 ccaagcatgctagtgcacctgcgaagccaccagaaaccttgttaccgatattctcatcaa 920
Query: 422 aggtttgcacggtatgagagcttgaagaggaagcagaagtcacttcagtagaaacagttg 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 921 aggtttgcacggtatgagagcttgaagaggaagcagaagtcacttcagtagaaacagttg 980
Query: 482 tttccttagtatgttcagcttcggt 506
||| |||||||||||||||||||||
Sbjct: 981 tttncttagtatgttcagcttcggt 1005
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6356
Number of Sequences: 1807
Number of extensions: 6356
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 906
length of database: 10,358,551
effective HSP length: 16
effective length of query: 890
effective length of database: 10,329,639
effective search space: 9193378710
effective search space used: 9193378710
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)